パッケージのインストールでゼロ以外の終了ステータスがありました
Rを昨年の12月12日にリリースされたバージョン3.6.2 "dark and stormy night"にアップデートしました。次のパッケージをインストールしようとしましたが、「パッケージXのインストールでゼロ以外の終了ステータスが発生しました」という同じエラーを受け取りました。
パッケージには、ほうき、tidyr、tidyselect、vctrs、およびrlangが含まれます。
私はほうきのドキュメントを調べましたが、明示的に以前のバージョンでのみサポートされていることを示すものは何もありませんでした。コンテキストについては、今日の午後、バージョン5.2.1を持っていて、同様のエラーを受け取り、アップグレードすることにしました。
問題が私の側にある可能性はありますか、mac OSX Catalina？この問題を解決するにはどうすればよいですか？
リクエストされたエラーの詳細は次のとおりです。
> library("tidyverse", lib.loc="/Library/Frameworks/R.framework/Versions/3.6/Resources/library")
Error: package or namespace load failed for ‘tidyverse’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘broom’
編集2：コメントで要求されたすべてのエラーとメッセージの完全なプリントアウト：
> install.packages("tidyverse")
also installing the dependencies ‘colorspace’, ‘sys’, ‘ps’, ‘highr’, ‘markdown’, ‘farver’, ‘labeling’, ‘munsell’, ‘RColorBrewer’, ‘askpass’, ‘rematch’, ‘prettyunits’, ‘processx’, ‘knitr’, ‘yaml’, ‘htmltools’, ‘evaluate’, ‘base64enc’, ‘tinytex’, ‘xfun’, ‘DBI’, ‘tidyselect’, ‘gtable’, ‘lazyeval’, ‘scales’, ‘viridisLite’, ‘withr’, ‘vctrs’, ‘curl’, ‘mime’, ‘openssl’, ‘clipr’, ‘cellranger’, ‘progress’, ‘callr’, ‘fs’, ‘rmarkdown’, ‘whisker’, ‘selectr’, ‘broom’, ‘dbplyr’, ‘forcats’, ‘ggplot2’, ‘haven’, ‘hms’, ‘httr’, ‘jsonlite’, ‘lubridate’, ‘modelr’, ‘readr’, ‘readxl’, ‘reprex’, ‘rlang’, ‘rstudioapi’, ‘rvest’, ‘tidyr’, ‘xml2’
There are binary versions available but the source versions are later:
binary source needs_compilation
prettyunits 1.1.0 1.1.1 FALSE
tidyselect 0.2.5 1.0.0 TRUE
vctrs 0.2.1 0.2.2 TRUE
callr 3.4.0 3.4.1 FALSE
broom 0.5.3 0.5.4 FALSE
rlang 0.4.2 0.4.3 TRUE
tidyr 1.0.0 1.0.2 TRUE
Do you want to install from sources the packages which need compilation? (Yes/no/cancel) yes
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/colorspace_1.4-1.tgz'
Content type 'application/x-gzip' length 2522321 bytes (2.4 MB)
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downloaded 2.4 MB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/sys_3.3.tgz'
Content type 'application/x-gzip' length 47231 bytes (46 KB)
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downloaded 46 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/ps_1.3.0.tgz'
Content type 'application/x-gzip' length 209460 bytes (204 KB)
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downloaded 204 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/highr_0.8.tgz'
Content type 'application/x-gzip' length 41180 bytes (40 KB)
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downloaded 40 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/markdown_1.1.tgz'
Content type 'application/x-gzip' length 199930 bytes (195 KB)
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downloaded 195 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/farver_2.0.3.tgz'
Content type 'application/x-gzip' length 1828397 bytes (1.7 MB)
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downloaded 1.7 MB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/labeling_0.3.tgz'
Content type 'application/x-gzip' length 61520 bytes (60 KB)
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downloaded 60 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/munsell_0.5.0.tgz'
Content type 'application/x-gzip' length 243642 bytes (237 KB)
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downloaded 237 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/RColorBrewer_1.1-2.tgz'
Content type 'application/x-gzip' length 53161 bytes (51 KB)
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downloaded 51 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/askpass_1.1.tgz'
Content type 'application/x-gzip' length 21926 bytes (21 KB)
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downloaded 21 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/rematch_1.0.1.tgz'
Content type 'application/x-gzip' length 12480 bytes (12 KB)
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downloaded 12 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/processx_3.4.1.tgz'
Content type 'application/x-gzip' length 236878 bytes (231 KB)
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downloaded 231 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/knitr_1.27.tgz'
Content type 'application/x-gzip' length 1380627 bytes (1.3 MB)
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downloaded 1.3 MB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/yaml_2.2.0.tgz'
Content type 'application/x-gzip' length 201073 bytes (196 KB)
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downloaded 196 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/htmltools_0.4.0.tgz'
Content type 'application/x-gzip' length 342242 bytes (334 KB)
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downloaded 334 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/evaluate_0.14.tgz'
Content type 'application/x-gzip' length 74657 bytes (72 KB)
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downloaded 72 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/base64enc_0.1-3.tgz'
Content type 'application/x-gzip' length 32230 bytes (31 KB)
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downloaded 31 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/tinytex_0.19.tgz'
Content type 'application/x-gzip' length 98971 bytes (96 KB)
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downloaded 96 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/xfun_0.12.tgz'
Content type 'application/x-gzip' length 178520 bytes (174 KB)
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downloaded 174 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/DBI_1.1.0.tgz'
Content type 'application/x-gzip' length 586234 bytes (572 KB)
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downloaded 572 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/gtable_0.3.0.tgz'
Content type 'application/x-gzip' length 432473 bytes (422 KB)
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downloaded 422 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/lazyeval_0.2.2.tgz'
Content type 'application/x-gzip' length 158838 bytes (155 KB)
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downloaded 155 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/scales_1.1.0.tgz'
Content type 'application/x-gzip' length 544693 bytes (531 KB)
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downloaded 531 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/viridisLite_0.3.0.tgz'
Content type 'application/x-gzip' length 57231 bytes (55 KB)
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/withr_2.1.2.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/curl_4.3.tgz'
Content type 'application/x-gzip' length 741337 bytes (723 KB)
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downloaded 723 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/mime_0.8.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/openssl_1.4.1.tgz'
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downloaded 2.6 MB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/clipr_0.7.0.tgz'
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downloaded 47 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/cellranger_1.1.0.tgz'
Content type 'application/x-gzip' length 103127 bytes (100 KB)
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/progress_1.2.2.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/fs_1.3.1.tgz'
Content type 'application/x-gzip' length 852880 bytes (832 KB)
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/rmarkdown_2.1.tgz'
Content type 'application/x-gzip' length 3556971 bytes (3.4 MB)
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downloaded 3.4 MB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/whisker_0.4.tgz'
Content type 'application/x-gzip' length 65424 bytes (63 KB)
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downloaded 63 KB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/selectr_0.4-2.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/dbplyr_1.4.2.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/forcats_0.4.0.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/ggplot2_3.2.1.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/haven_2.2.0.tgz'
Content type 'application/x-gzip' length 1077133 bytes (1.0 MB)
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downloaded 1.0 MB
trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/hms_0.5.3.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/httr_1.4.1.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/jsonlite_1.6.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/lubridate_1.7.4.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/modelr_0.1.5.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/readr_1.3.1.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/readxl_1.3.1.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/reprex_0.3.0.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/rstudioapi_0.10.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/rvest_0.3.5.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/xml2_1.2.2.tgz'
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trying URL 'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/tidyverse_1.3.0.tgz'
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The downloaded binary packages are in
/var/folders/rb/qs7xx8rs633bk4njyk_6t7bh0000gn/T//RtmphOGt7Z/downloaded_packages
installing the source packages ‘prettyunits’, ‘tidyselect’, ‘vctrs’, ‘callr’, ‘broom’, ‘rlang’, ‘tidyr’
trying URL 'https://cran.rstudio.com/src/contrib/prettyunits_1.1.1.tar.gz'
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trying URL 'https://cran.rstudio.com/src/contrib/tidyselect_1.0.0.tar.gz'
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trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.2.2.tar.gz'
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trying URL 'https://cran.rstudio.com/src/contrib/callr_3.4.1.tar.gz'
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trying URL 'https://cran.rstudio.com/src/contrib/broom_0.5.4.tar.gz'
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trying URL 'https://cran.rstudio.com/src/contrib/rlang_0.4.3.tar.gz'
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trying URL 'https://cran.rstudio.com/src/contrib/tidyr_1.0.2.tar.gz'
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* installing *source* package ‘prettyunits’ ...
** package ‘prettyunits’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (prettyunits)
* installing *source* package ‘callr’ ...
** package ‘callr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (callr)
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
Agreeing to the Xcode/iOS license requires admin privileges, please run “Sudo xcodebuild -license” and then retry this command.
ERROR: compilation failed for package ‘rlang’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/rlang’
Warning in install.packages :
installation of package ‘rlang’ had non-zero exit status
ERROR: dependency ‘rlang’ is not available for package ‘vctrs’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/vctrs’
Warning in install.packages :
installation of package ‘vctrs’ had non-zero exit status
ERROR: dependencies ‘rlang’, ‘vctrs’ are not available for package ‘tidyselect’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/tidyselect’
Warning in install.packages :
installation of package ‘tidyselect’ had non-zero exit status
ERROR: dependencies ‘rlang’, ‘tidyselect’, ‘vctrs’ are not available for package ‘tidyr’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/tidyr’
Warning in install.packages :
installation of package ‘tidyr’ had non-zero exit status
ERROR: dependency ‘tidyr’ is not available for package ‘broom’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/broom’
Warning in install.packages :
installation of package ‘broom’ had non-zero exit status
The downloaded source packages are in
‘/private/var/folders/rb/qs7xx8rs633bk4njyk_6t7bh0000gn/T/RtmphOGt7Z/downloaded_packages’
install.packages("broom")（またはパッケージを挿入）を呼び出すと、次のようなメッセージが表示されます。
Do you want to install from sources the packages which need compilation? (Yes/no/cancel)あなたが答えたyes。
noを試して結果を比較してください。これで問題が解決するはずです。